Commits · d7f24e047c3f28c2c633f9032e2ff1b386c190c6 · 2024 Competition / Software Tools / Evry-Paris-Saclay · GitLab

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Sep 22, 2024
- added src comparison to summary · d7f24e04
  paradoxe-tech authored 5 months ago
  
  d7f24e04
- added pytorch_cluster to env · 896fc561
  paradoxe-tech authored 5 months ago
  
  896fc561
- Merge branch 'main' of github.com:Phagevo/Software into main · db8f1714
  Victor ROBERT LAMBRECHT authored 5 months ago
  
  db8f1714
- fixed minor issues · ad61b0d5
  Victor ROBERT LAMBRECHT authored 5 months ago
  
  ad61b0d5
- changed /mutants to / · 5c497826
  paradoxe-tech authored 5 months ago
  
  5c497826
- fixed batch output compatibility · fc425ffa
  Victor ROBERT LAMBRECHT authored 5 months ago
  
  fc425ffa
Sep 21, 2024
- results method to write summary file · 32d10693
  paradoxe-tech authored 5 months ago
  
  32d10693
- fixed parser for number of batches · 4515efa7
  Victor ROBERT LAMBRECHT authored 5 months ago
  
  4515efa7
- siganture edit and parameter -n added · e71effda
  paradoxe-tech authored 5 months ago
  
  e71effda
- removed get_mutations and evaluate_results · 18030851
  Victor ROBERT LAMBRECHT authored 5 months ago
  
  18030851
- cleaned up the mutations code · fc6c1189
  Victor ROBERT LAMBRECHT authored 5 months ago
  
  fc6c1189
- fixed docking · 00c9c4c7
  Victor ROBERT LAMBRECHT authored 5 months ago
  
  00c9c4c7
- evaluate_results can now also print the SCORE (dG) · b47dd6c7
  Victor ROBERT LAMBRECHT authored 5 months ago
  
  b47dd6c7
- added the replit files to evaluate the results of the inference · 1c5ba003
  Victor ROBERT LAMBRECHT authored 5 months ago
  
  1c5ba003
- renamed env to Flint · 8f0dcaba
  paradoxe-tech authored 5 months ago
  
  8f0dcaba
- added new PocletGen dir name · e7174261
  paradoxe-tech authored 5 months ago
  
  e7174261
- resolve top-level imports · 28443103
  paradoxe-tech authored 5 months ago
  
  28443103
- setup the project name as "Flint" · 4eb73301
  paradoxe-tech authored 5 months ago
  
  4eb73301
Sep 20, 2024
- cleaned up to code, prepared main.py to create new folder the the result of each batch · 8c2582a9
  Victor ROBERT LAMBRECHT authored 5 months ago
  
  8c2582a9
- edited sampler result (whole_protein name is now receptor_path) · 66500027
  Victor ROBERT LAMBRECHT authored 5 months ago
  
  66500027
- changed pocketgen to PocketGen to be in line with git clone · 7f928c0b
  Victor ROBERT LAMBRECHT authored 5 months ago
  
  7f928c0b
- argument parser natively supports default values · f9a7d424
  paradoxe-tech authored 5 months ago
  
  f9a7d424
- fixed critical error (pocket -> protein) · 546386bb
  paradoxe-tech authored 5 months ago
  
  546386bb
Sep 19, 2024
- incorrect bash code block · 1d5c9853
  paradoxe-tech authored 5 months ago
  
  1d5c9853
- added new details about PocketGen fork · a02bb367
  paradoxe-tech authored 5 months ago
  
  a02bb367
Sep 18, 2024
- model inference method draft · 52066294
  paradoxe-tech authored 5 months ago
  
  52066294
- file cleaning & comments · 0debba6b
  paradoxe-tech authored 5 months ago
  
  0debba6b
- minor fixes #9, #10 · 73801ef2
  paradoxe-tech authored 5 months ago
  
  73801ef2
Sep 17, 2024
- fixed param switch on l6 · f3f51a97
  paradoxe-tech authored 5 months ago
  
  f3f51a97
- signature change in model constructor · 07a8daa4
  paradoxe-tech authored 5 months ago
  
  07a8daa4
- implemented argument system for main · 2a3a6af9
  Kenan Oggad authored 5 months ago
  
  2a3a6af9
- updated README.md (closes #4) · ca9ab8e8
  Kenan Oggad authored 5 months ago
  
  ca9ab8e8
- updated env.yaml (#6 & #7) · 16d45753
  Kenan Oggad authored 5 months ago
  
  16d45753
- fIxed / translated comments (#1) · 8d29facd
  Kenan Oggad authored 5 months ago
  
  8d29facd
- added support for future arg (Model param) · df25dd91
  paradoxe-tech authored 5 months ago
  
  df25dd91
- load inputs in model from files · eee1a074
  paradoxe-tech authored 5 months ago
  
  eee1a074
- precision of function signatures · 2ac848fb
  paradoxe-tech authored 5 months ago
  
  2ac848fb
- starting model implementation · 71baee4f
  paradoxe-tech authored 5 months ago
  
  71baee4f
Sep 16, 2024
- minor change in README · ddbc9e78
  paradoxe-tech authored 5 months ago
  
  ddbc9e78
- README and yml -> yaml · f49ceff6
  paradoxe-tech authored 5 months ago
  
  f49ceff6