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Commit 7f44f82c authored by Philip Mundt's avatar Philip Mundt
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engineering

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......@@ -4,15 +4,15 @@ import { LoremShort } from "../components/Loremipsum";
import { openElement } from "../utils/openElement";
import { H3, H4 } from "../components/Headings";
import { useTabNavigation } from "../utils/TabNavigation";
import { TabScrollLink } from "../components/Link";
import { Collapsible } from "../components/Collapsible";
import { useNavigation } from "../utils";
import { TabScrollLink } from "../components/Link";
export function Engineering() {
useTabNavigation();
const {goToPagesAndOpenTab} = useNavigation();
const {goToPagesAndOpenTab} = useNavigation ();
return (
<>
<div className="row mt-4">
......@@ -360,34 +360,70 @@ export function Engineering() {
<section id="Delivery sec" >
<div className="eng-box box" >
<H3 id="Delivery" text="Delivery"></H3>
<p><LoremShort></LoremShort></p>
<p>The design path of our lipid nanoparticle (LNP) for mRNA delivery underwent multiple cycles of research and discussion, marked by important decision points and learnings along the way. By ongoing further improvement, we designed our lungs-specific LNP called AirBuddy with improved stability aspects, becoming more precise in the delivery of our therapeutic cargo LNP by LNP.</p>
</div>
<div className="box" >
<p id="del1">
<h3>del1</h3>
<LoremShort></LoremShort>
<h3>Iteration 1 - AVVs vs LNPs</h3>
<p>Initially, this project part started with a discussion with <a onClick={() => goToPagesAndOpenTab('kristian', '/human-practices')}> Prof. Dr. Krisitan Müller </a>, PI of our team with expertise in Adeno-associated viruses (AAVs), focusing on whether to pursue LNPs or AAVs for mRNA delivery. The deciding factor leaned towards LNPs, as they offered a significant advantages including less immunogenic potential [1] and bigger loading capacity [2]. LNPs loading capacity depends on various factors, but in general they offer a bigger cargo size compared to 4.7 kb for AVVs [3]. This allows the delivery of bigger mRNA constructs compared to AAVs, which is needed for our Prime Editing construct.</p>
<p><a onClick={() => goToPagesAndOpenTab('weber', '/human-practices')}>Prof. Wolf-Michael Weber and Dr. Jörg Große-Onnebrink</a> from the UKM in Münster were our first point of contact for the development of our LNP for CFTR treatment. Moreover, <a onClick={() => goToPagesAndOpenTab('radukic', '/human-practices')}>Dr. Marco Radukic </a>form Bielefeld University provided us with a very useful cargo, namely minicircle DNA carrying the EYFP gene from <a href="https://www.plasmidfactory.com/custom-dna/minicircle-dna/" title="PlasmidFactory" >PlasmidFactory</a> as a positive control for our experiments. He also helped us establish protocols for LNP synthesis and LNP transfection in our lab.</p>
</p>
<p><LoremShort></LoremShort></p>
<p><LoremShort></LoremShort></p>
</div>
<div className="box" >
<p id="del2">
<h3>del2</h3>
<LoremShort></LoremShort>
<p><LoremShort></LoremShort></p>
<p><LoremShort></LoremShort></p>
<h3>Interation 2 - Cayman LNP</h3>
In the first experimental phase, LNPs from <strong>Cayman Chemical LNP Exploration Kit (LNP-102)</strong> consisting of SM-102, 1,2-DSPC, cholesterol, and DMG-PEG(2000) [4] were tested with mRNA encoding fluorescent protein to evaluate their transfection efficiency. However, the results showed low transfection efficiency, and the particles did not show specificity for the lungs, which was a critical requirement for the project. This led the team to reconsider the choice of the LNP.
</p>
<figure>
<img src="https://static.igem.wiki/teams/5247/delivery/cayman-lnp-freigestellt.webp" alt="Cayman LNP"/>
<figcaption>
<b>Figure 1.</b>
Schematic view of LNP-102 from Cayman Chemical
</figcaption>
</figure>
</div>
<div className="box" >
<p id="del3">
<h3>del3</h3>
<LoremShort></LoremShort>
<h3>Interation 3 - Corden LNP</h3>
In the next phase, we chose to use a new LNP formulation, namely the <strong>LNP Starter Kit #2</strong> [5] of <a onClick={() => goToPagesAndOpenTab('corden', '/human-practices')}>Corden Pharma</a>, because it offered several advantages over the initial option. The key benefit of this new LNP lies in the use of DOTAP, a cationic lipid that enhances interaction with negatively charged cell membranes in the lungs, improving cellular uptake efficiency. While SM-102 in the Cayman LNP-102 is effective for systemic delivery, it lacks the same specificity for lung tissue. Additionally, Corden Pharma’s plant-based BotaniChol® prevents animal-sourced contamination and helps address the global lipid shortage for vaccine production. mPEG-2000-DSPE provides superior stability and reduces immune system activation over time, making it particularly suitable for pulmonary delivery. This made the new formulation a better choice for safely and effectively targeting lung tissue, especially in delivering therapies for CFTR-related diseases. During this time, the team encountered a paper on capsaicin-chitosan nanoparticles, which explored its use in targeted delivery and higher transfection efficiency. However, after further investigation and consultation of <a onClick={() => goToPagesAndOpenTab('kolonkofirst', '/human-practices')}>Dr. Katharina Kolonko</a>, it was determined that capsaicin was not suitable for our planned pulmonary application.
</p>
<figure>
<img src="https://static.igem.wiki/teams/5247/delivery/corden-lnp-freigestellt.webp" alt="Corden LNP"/>
<figcaption>
<b>Figure 2.</b>
Schematic view of LNP #2 from Corden Pharma with DOTAP as cationic lipid, DSPC as phospholipid and mPEG-200-DSPE as PEG lipid.
</figcaption>
</figure>
</div>
<div className="box" >
<p id="del4">
<h3>Interation 4 - Spray-dried SORT LNP called Airbuddy</h3>
The next design iteration incorporated the insights from Wang's LNP work for building upon SORT principles to make the nanoparticles lung-specific [6]. The main components include DMG-PEG 2000, cholesterol, DOPE and DOTAP as phospholipids and cationic lipids such as 4A3-SC8. In our LNP development, we carefully considered the use of PEG. While PEG can improve stability, it can also reduce cellular uptake and induce immune responses, necessitating a balanced approach to its inclusion [7].
<Collapsible id="Col1" open={false} title="header">
<p>Insert text here</p>
</Collapsible>
<p>DMG-PEG2000 of the SORT LNP offers better biodegradability and enhanced stability in pulmonary applications - it is known for its faster clearance and reduced potential for long-term toxicity. To ensure we addressed this issue, cytotoxicity tests were performed in addition to the determination of physical properties in cooperation with the Physical and Biophysical Chemistry working group of Bielefeld University to characterize the LNPs. More details about the composition of the SORT LNPs and function of the components can be read below.</p>
<Collapsible id="Col2" open={false} title="header">
<p>Insert text here</p>
</Collapsible>
<p>The final innovation for our LNP to become <strong>AirBuddy</strong> came through consultation with Benjamin Winkeljann from <a onClick={() => goToPagesAndOpenTab('rnhale', '/human-practices')}> Rnhale </a> , where the use of spray-drying techniques was discussed. Spray-drying the LNPs, instead of using traditional methods, helped improve stability and eco-friendliness of the product [8]. The spray-dried SORT LNPs demonstrated lower cytotoxicity, and the technique proved effective in maintaining particle integrity.</p>
<figure>
<img src="https://static.igem.wiki/teams/5247/delivery/sort-lnp-freigestellt.webp" alt="AirBuudy"/>
<figcaption>
<b>Figure 3.</b>
Schematic view of our lung-specific SORT LNP called AirBuddy.
</figcaption>
</figure>
</p>
</div>
<div className="box" >
<p id="del5">
<h3>Outlook</h3>
Ultimately, through continuous cycles of experimentation, feedback, and optimization, a LNP formulation called AirBuddy was designed using SORT LNPs and a spray-drying process, achieving lung specificity and improved safety. We also want to state that for our LNP is further room for improvement. Intensive research led us to the realization that, among other modifications, antibody conjugation as a surface modification of our LNP for cell type-specific administration, more specifically club cells [9] and ionocytes [11] as most CFTR-expressing lung epithelial cells, would round off our most important aspect of precision. In addition, the discussion with Benjamin Moorlach, chitosan expert working at FH Bielefeld, provided new ideas for improvement by complexing the mRNA with chitosan to improve the stability of the cargo during spray drying and nebulization.
</p>
<p><LoremShort></LoremShort></p>
<p><LoremShort></LoremShort></p>
</div>
<br/>
<div className="row ">
<div className="row">
<div className="col">
<div className="left"><ButtonOneEngineering label="Previous" open="pegrna" scrollToId="pegRNA"/></div>
</div>
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