Update file model.html

wiki/pages/model.html

@@ -114,6 +114,15 @@
         <li>Energy step-size: 0.001 kJ/mol</li>
       </ul>
       <li>Structure equilibration with NPT Ensemble:</li>
+      <ul class="sub-arrow-list">
+        <li>Timestep: 20 femtoseconds</li>
+        <li>Simulation Steps: 10^6 (20 nanosecond total)</li>
+        <li>Cutoff Scheme: Verlet</li>
+        <li>Temperature Coupling: v-rescale</li>
+        <li>Pressure Coupling: Berendson Barostat</li>
+        <li>Periodic Boundary Conditions: XYZ</li>
+        <li>Simulation temperature: 400K. 400K was used to simulate a higher energy system to allow for faster protein structure changes</li>
+      </ul>
     </ul>
   </div>
 </div>