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2022 Competition
Makerere_Uganda
Commits
d4e785c7
Commit
d4e785c7
authored
2 years ago
by
bogere moses
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add work for experiments
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2 years ago
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wiki/pages/experiments.html
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@@ -64,13 +64,38 @@
<li>
Additionally, 2 isolated plasmids from each construct is sequenced at joint regions by the Sanger method.
</li>
<li>
Finally, whole plasmid sequencing by Next Generation Sequencing (NGS) on two plasmids–one each from randomly selected plasmid strain.
</li>
</ol>
<h6><b>
Notes
</b></h6>
<p>
The gene sequences (AiOSC1, AiCYP71D2 and candidate Melia ) were extracted from the NCBI database
from a study that obtained the sequences using cDNA obtained from RNA extracted from
the A.indica plant (Hou et al). The gene fragments were synthesized from Twist Bioscience.
</p>
<h4>
SOP #2 Yeast strain construction
</h4>
<hr>
<p>
For constructing an efficient dihydroniloticin-producing strain, two strains are to
be made, one control strain with the AiOSC1 (2,3 oxidosqualene cylase) and AiCYP71D2
(azadirachta indica cytochrome oxidase) fragment containing plasmid and the AiOSC1
and candidate Melia azederach cytochrome oxidase fragment containing plasmid.
</p>
<h6><b>
Materials
</b></h6>
<ul>
<li>
Constructed plasmids
</li>
<li>
Water bath
</li>
<li>
CSM-Ura agar plates
</li>
<li>
Incubator
</li>
<li>
Sterile water
</li>
<li>
Shaking incubator
</li>
<li>
Centrifuge
</li>
<li>
Microcentrifuge
</li>
<li>
Falcon tubes
</li>
<li>
Vortexer
</li>
<li>
Micropipette and pipette tips
</li>
<li>
Polyethylene glycol
</li>
<li>
Lithium acetate
</li>
<li>
Microcentrifuge tubes
</li>
<li>
Spreader
</li>
</ul>
</div>
<div
class=
"col-lg-4"
>
<h2>
Inspirations
</h2>
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