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Commit 0b484f90 authored by Ranjit Patro's avatar Ranjit Patro :slight_smile:
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Update public/contribution, public/engineering

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a suitable methodology to test the functionality of our purified 6X His tagged Fim H.</p>
<p>We found that Team iGEM13_NYMU-Taipei devised a fluorescence based methodology to test the
functionality of the plac+RFP-FimH protein by expressing a in fusion protein of RFP-FimH and
functionality of the plac+RFP-FimH protein by expressing it as a fusion protein of RFP-FimH and
then checking the FimH binding to mannose. Later From our literature surveys
related to the testing of FimH protein, we have found another in vitro methodology that can
serve as a functionality check of purified FimH binding to mannose which used alpha-D
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<div class="container">
<div class="row text-left mb-5">
<div class="col-lg-6" style="width: 100%;">
<h2 class="heading text-primary"><b>Design*</b></h2>
<h2 class="heading text-primary"><b>Design</b></h2>
<h3>Introduction</h3>
<p>Our proposed aptamer based kit apt4uti kit is an engineered syn-bio device that can be used to
<p>Our proposed aptamer based kit Apt4UTI kit is an engineered syn-bio device that can be used to
detect urinary tract infections in minutes with higher sensitivity and specificity. Aptamer is
developed based on the selex process. Selex is of two types, one ligand based selex and another
whole cell selex. Ligand based selex approaches target a particular component of target organism
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<h3>Biology softwares:</h3>
<p>For the cloning experiment and aptamer designing, we got hands on experience of snapgene and pymol for the designing of plasmid with our insert and simulation of FimH and aptamers respectively.</p>
<h2 style="margin-top: 3rem;"><b>*References:</b></h2>
<h2 style="margin-top: 3rem;"><b>References:</b></h2>
<ol>
<li>Wan, Q., Liu, X. and Zu, Y. (2021). Oligonucleotide aptamers for pathogen detection and infectious disease control. Theranostics, 11(18), pp.9133–9161. DOI: <a href="https://doi.org/10.7150/thno.61804">10.7150/thno.61804</a></li>
<li>Schembri, M.A., Hasman, H. and Klemm, P. (2000). Expression and purification of the mannose recognition domain of the FimH adhesin. FEMS Microbiology Letters, 188(2), pp.147–151. DOI: <a href="https://doi.org/10.1111/j.1574-6968.2000.tb09186.x">10.1111/j.1574-6968.2000.tb09186.x</a>
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