New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_010473 1 =0 (0.000)48 (1.250) 44/398 0.1 100% intergenic (–/‑189) –/thrL –/thr operon leader peptide
?NC_010473 = 4686137 0 (0.000)intergenic (+24/–) yjtD/– tRNA/rRNA methyltransferase/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCA  >  NC_010473/1‑199
                                                                                                                                                                                                       |                                                                                                                                                                                                               
catcaactgcaagctttacgcgaacgagccatgacattgctgacgactctggcagtggcagatgacataaaactggttgattcgttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaaacgccttagtaagtatttttca                                                                                                                                                                                                                 >  1:12873S9‑M1/200‑200 (MQ=255)
 catcaactgcaagctttacgcgaacgagccatgacattgctgacgactctggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcac                                                                                                                                                                                                                <  1:12096S11‑M1/2‑2 (MQ=255)
        tgcaagctttacgcgaacgagccatgacattgctgacgactctggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑Ca                                                                                                                                                                                                     >  1:27455S16‑M1/192‑200 (MQ=255)
             caagctttacgcgaacgagccatgacattgctgacgactctggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtattcAGCTTTT‑‑CATTCTg                                                                                                                                                                                                <  1:9624S17‑M1/14‑1 (MQ=255)
                 tacgcgaacgagccatgacattgctgacgactctggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTg                                                                                                                                                                                            >  1:25834S3‑M1/183‑200 (MQ=255)
                     cgaacgagccatgacattgctgacgactctggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAAc                                                                                                                                                                                        >  1:16810S4‑M1/179‑200 (MQ=255)
                         cgagccatgacattgctgacgactctggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGc                                                                                                                                                                                    >  1:21151S53‑M1/175‑200 (MQ=255)
                            cgatgacattgctgacgactctggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAat                                                                                                                                                                                 >  1:12704S7‑M1/172‑200 (MQ=255)
                                 ccatgacattgctgactctggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttcgtcagtcttttcAGCTTC‑‑CATTCTGACTGCAACGGGCAATATGtct                                                                                                                                                                           <  1:16490S2‑M1/34‑1 (MQ=255)
                                    attgctgacgactctggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTctct                                                                                                                                                                         <  1:6721S10‑M1/37‑1 (MQ=255)
                                     ttgctgacgactctggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCtg                                                                                                                                                                        <  1:23070S2‑M1/38‑1 (MQ=255)
                                      tgctgacgactctggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCtgt                                                                                                                                                                       <  1:12875S8‑M1/39‑1 (MQ=255)
                                      tgctgacgactctggcagtagcagtcgcataaaactggtcgactggttacaacaacgcctggggctttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCtgt                                                                                                                                                                       <  1:8054S67‑M1/39‑1 (MQ=255)
                                          gacgactctggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGGCTTTTTTCATTCTGACTGCAACGGGCAATATGTCTCtgtg                                                                                                                                                                      <  1:32391S12‑M1/43‑1 (MQ=255)
                                          gacgactctggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTg‑‑‑g                                                                                                                                                                <  1:2601S18‑M1/43‑1 (MQ=255)
                                            cgactctggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GAt                                                                                                                                                              <  1:24520S17‑M1/45‑1 (MQ=255)
                                                 ggcagtggcagatggtacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTaaaa                                                                                                                                                         >  1:6006S38‑M1/151‑200 (MQ=255)
                                                   ctggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttgagcatcttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTaaaaaa                                                                                                                                                       <  1:899S3‑M1/52‑1 (MQ=255)
                                                      ggcagtggcagatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgatacatgaacgttgcaccgtttgctgcatgatattgaaaaacatcaccaaataaaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAaga                                                                                                                                                   >  1:4980S48‑M1/146‑200 (MQ=255)
                                                             gatgacataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTg                                                                                                                                            >  1:11611S19‑M1/139‑200 (MQ=255)
                                                                    cataaaactggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttcatcatcttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTATTTGAGTAAAAAAAGAGTGTCTGATag                                                                                                                                        <  1:6875S151‑M1/69‑1 (MQ=255)
                                                                        actggtcgactggttacaacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTc                                                                                                                                 <  1:31989S3‑M1/73‑1 (MQ=255)
                                                                                        caacaacgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAA‑‑GAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCg                                                                                                              >  1:2042S30‑M1/112‑200 (MQ=255)
                                                                                             acgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGa                                                                                                           >  1:9998S6‑M1/107‑200 (MQ=255)
                                                                                             acgcctggggcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAg                                                                                                          >  1:10780S42‑M1/107‑200 (MQ=255)
                                                                                               aacaacgcctggtgcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaagaaacgcgagaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGt                                                                                                         >  1:11877S89‑M1/105‑200 (MQ=255)
                                                                                                      gcttttagagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTaa                                                                                                  >  1:28413S20‑M1/98‑200 (MQ=255)
                                                                                                            agagcaacgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTTGAACTGGTTACCTGCCGTGAGTAAATTAAAAttt                                                                                             <  1:4566S37‑M1/109‑1 (MQ=255)
                                                                                                                   cgagacacggcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACt                                                                                     <  1:14420S13‑M1/116‑1 (MQ=255)
                                                                                                                            gcaatgttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACt                                                                            <  1:22358S6‑M1/125‑1 (MQ=255)
                                                                                                                                  ttgcaccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATAc                                                                      >  1:6346S2‑M1/70‑200 (MQ=255)
                                                                                                                                      accgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTaa                                                                 <  1:17738S17‑M1/135‑1 (MQ=255)
                                                                                                                                       ccgtttgctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtacttttcAGCTTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTa                                                                  <  1:12719S59‑M1/136‑1 (MQ=255)
                                                                                                                                              ctgcatgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTATATATC‑‑‑AT‑‑AAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAgg                                                       <  1:11548S179‑M1/143‑1 (MQ=255)
                                                                                                                                                   tgatattgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTT‑‑CATCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑CATTAAAAATATAT‑‑‑TGATAGCAGCTTCTGAACTCGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGca                                              <  1:22262S22‑M1/148‑1 (MQ=255)
                                                                                                                                                       attgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAgc                                                 <  1:11851S37‑M1/152‑1 (MQ=255)
                                                                                                                                                        ttgaaaaaaatatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAgcg                                                >  1:3207S26‑M1/48‑200 (MQ=255)
                                                                                                                                                           tgaaaaacatcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGca                                              >  1:4054S3‑M1/45‑200 (MQ=255)
                                                                                                                                                                   atcaccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAA‑‑‑‑GTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATaaaa                                 >  1:14423S48‑M1/37‑200 (MQ=255)
                                                                                                                                                                     caccaaataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGAGCTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATaaaa                                 >  1:17939S13‑M1/35‑200 (MQ=255)
                                                                                                                                                                     caccaaataaaaaacgccttagtaagtatttttcAGCTTAGT‑‑TATTTTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATT‑‑‑‑‑AGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAAt                               <  1:28430S28‑M1/166‑1 (MQ=255)
                                                                                                                                                                           ataaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTa                             <  1:3838S97‑M1/172‑1 (MQ=255)
                                                                                                                                                                            taaaaaacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTAc                            >  1:313S35‑M1/28‑200 (MQ=255)
                                                                                                                                                                                 aacgccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAGATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTa                      >  1:2283S2‑M1/23‑200 (MQ=255)
                                                                                                                                                                                    gccttagtaagtatttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTac                     >  1:13908S44‑M1/20‑200 (MQ=255)
                                                                                                                                                                                                tattttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGaa       <  1:32776S2‑M1/193‑1 (MQ=255)
                                                                                                                                                                                                  ttttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGaaa      >  1:5361S7‑M1/6‑200 (MQ=255)
                                                                                                                                                                                                    ttcAGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGAACTTCCGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCa  >  1:23259S60‑M1/4‑200 (MQ=255)
                                                                                                                                                                                                       |                                                                                                                                                                                                               
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCTTTT‑‑CATTCTGACTGCAACGGGCAATATGTCTCTGTGTG‑‑‑GATTAAAAAAAGAGTGTCTGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTACACAACATCCATGAAACGCA  >  NC_010473/1‑199

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 50 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.