diff --git a/wiki/pages/experiments.html b/wiki/pages/experiments.html index 0f481ea4031bdfbbfdbcbfbe0de6da4c662e004c..d3e1021f917895411335e0814f6af5f8bb965821 100644 --- a/wiki/pages/experiments.html +++ b/wiki/pages/experiments.html @@ -782,139 +782,7 @@ <!-- Ch and quantification--> - <div class="myPage-paragraph-headline-h3 expstep_name">Characterization and quantification of BC - production in <i>E. coli</i> EcNP - </div> - <div class="panel"> - <div class="panel-heading" role="tab" id="heading68"> - <h4 class="panel-title"> - <a role="button" class="collapsed" data-toggle="collapse" href="#collapse68" - aria-expanded="true" aria-controls="collapse68"> - Requirements - </a> - </h4> - </div> - <div id="collapse68" class="panel-collapse collapse" role="tabpanel"> - <div class="panel-body"> - <p>◠Recombinant <i>E. coli</i> Nissle 1917 (EcNP) strain<br> - ◠LB liquid medium<br> - ◠Ampicillin (100 mg/mL)<br> - ◠Kanamycin (50 mg/mL)<br> - ◠500 g/L glucose solution<br> - ◠37 °C shaking incubator<br> - ◠500 g/L Congo red solution<br> - ◠Dynamic fermentation BC standard<br> - ◠Tecan Infinite M200 microplate reader<br> - ◠96-well plate<br> - </p> - </div> - </div> - </div> - <div class="myPage-paragraph-headline-h4 th4"> - A. Determination of BC standard curve - </div> - <div class="panel"> - <div class="panel-heading" role="tab" id="heading69"> - <h4 class="panel-title"> - <a class="collapsed" role="button" data-toggle="collapse" href="#collapse69" - aria-expanded="false" aria-controls="collapse69"> - Protocol - </a> - </h4> - </div> - <div id="collapse69" class="panel-collapse collapse" role="tabpanel"> - <div class="panel-body"> - <p> - 1. Prepare BC standard samples with concentrations of 0, 20, 40, 60, 80, and 100 mg/L. - Perform five parallel experiments for each concentration.<br> - 2. Add 1 mL of BC standard solution to a 1.5-mL centrifuge tube, then add 1 μL of 500 g/L - Congo red solution. Immediately vortex the mixture for 10 s.<br> - <i>Note: Please mix well before using Congo red solution.</i><br> - 3. Culture at room temperature for 30 minutes away from light.<br> - 4. Centrifuge at 9000 <i>r.p.m.</i> for 7 minutes.<br> - 5. Take 200 μL of the supernatant and transfer it to a 96-well plate. Measure OD490 - values.<br> - 6. Plot a standard curve with the absorbance values to BC concentrations.<br> - </p> - </div> - </div> - </div> - - <div class="myPage-paragraph-headline-h4 th4"> - B. Measurement of BC samples - </div> - <div class="panel"> - <div class="panel-heading" role="tab" id="heading70"> - <h4 class="panel-title"> - <a class="collapsed" role="button" data-toggle="collapse" href="#collapse70" - aria-expanded="false" aria-controls="collapse70"> - Before the experiment - </a> - </h4> - </div> - <div id="collapse70" class="panel-collapse collapse" role="tabpanel"> - <div class="panel-body"> - <p> - 1. Inoculate the recombinant EcNP strains in 2% ratio into 10 mL of LB medium containing<br> - corresponding antibiotics and glucose (20 g/L) at 37 °C and 200 <i>r.p.m.</i>.<br> - 2. Add IPTG at final concentrations of 0.5 mM to it when the OD600 reaches 0.8.<br> - 3. Shake the cultures at 37 °C with shaking at 200 <i>r.p.m.</i> for several hours.<br> - <i>Note: Perform steps 1-3 for the negative control as well.</i> - - </p> - </div> - </div> - </div> - <div class="panel"> - <div class="panel-heading" role="tab" id="heading71"> - <h4 class="panel-title"> - <a class="collapsed" role="button" data-toggle="collapse" href="#collapse71" - aria-expanded="false" aria-controls="collapse71"> - Protocol - </a> - </h4> - </div> - <div id="collapse71" class="panel-collapse collapse" role="tabpanel"> - <div class="panel-body"> - <p> - 1. Combine 1 mL of bacterial culture with 1 μL of 500 g/L Congo Red solution in a 1.5-mL - centrifuge tube. Immediately vortex the mixture for 10 s.<br> - <i>Note: Please mix well before using Congo red solution.</i><br> - 2. Culture at room temperature for 30 minutes away from light.<br> - 3. Centrifuge at 9000 <i>r.p.m.</i> for 7 minutes.<br> - 4. Take 200 μL of the supernatant and transfer it to a 96-well plate. Measure - OD<sub>490</sub> values to calculate concentration of BC.<br> - <i>Note: Be careful to ensure that the final data falls within the standard curve range.</i><br> - </p> - </div> - </div> - </div> - - - <div class="myPage-paragraph-headline-h4 th4"> - C. Test of the optimal IPTG induction concentration - </div> - <div class="panel"> - <div class="panel-heading" role="tab" id="heading72"> - <h4 class="panel-title"> - <a class="collapsed" role="button" data-toggle="collapse" href="#collapse72" - aria-expanded="false" aria-controls="collapse72"> - Protocol - </a> - </h4> - </div> - <div id="collapse72" class="panel-collapse collapse" role="tabpanel"> - <div class="panel-body"> - <p> - 1. Inoculate the recombinant EcNP strains in 2% ratio into 10 mL of LB medium containing - corresponding antibiotics and glucose (20 g/L) at 37 °C and 200 <i>r.p.m.</i>.<br> - 2. Add IPTG at final concentrations of 0, 0.1, 0.5, and 1 mM to each system when the OD<sub>600</sub> - reaches 0.8.<br> - 3. Take samples after 4 hours and compare the BC content in the bacterial culture.<br> - </p> - </div> - </div> - </div> + <div class="myPage-paragraph-headline-h3 expstep_name">Production and test of cross-linked water-retention material