From ce53da4b4c70cc50c8d99a72cd9ba56d992abed4 Mon Sep 17 00:00:00 2001
From: Arya Ajit Gohad <aryagohad21@gmail.com>
Date: Fri, 16 Dec 2022 07:44:22 +0000
Subject: [PATCH] Update wiki/pages/part-collection.html
---
wiki/pages/part-collection.html | 150 ++++++++++++++++++++++----------
1 file changed, 106 insertions(+), 44 deletions(-)
diff --git a/wiki/pages/part-collection.html b/wiki/pages/part-collection.html
index 5dcd186..f265033 100644
--- a/wiki/pages/part-collection.html
+++ b/wiki/pages/part-collection.html
@@ -33,200 +33,262 @@
<!-- </div>
</div>
+<div class="row mt-4">
+ <div class="col"> -->
+<div class="row mt-4">
+ <div class="col">
+ <h2>Parts Added to the Registry</h2>
+ <hr>
+ <p>We have documented all our literature search on our Wiki Page. We have also added the parts that we have used and made them openly available for any team. We have updated the code of BBrickIt and it is open source for anyone to use and available on our Software Page. We have also made our protocols and project models available for any present or future iGEM teams to use. We have also made Education and Communication materials available for anyone to use. It is encouraged that people follow or make sure that the Sustainability practices and procedures that we have followed at the lab level are followed.</p>
+ <br>
+ <!-- </div>
+</div>
+
<div class="row mt-4">
<div class="col"> -->
<div class="table-responsive">
<table class="table">
<tbody>
-<tr > <td >Links</td>
-<td >Name</td>
-<td >Symbol</td>
-<td >Comparative Performace</td>
-<td >Sequence</td>
+<tr > <td > <b>Links</b></td>
+<td ><b>Name</b></td>
+<td ><b>Symbol</b></td>
+<td ><b>Comparative Performance in DH5alpha strain</b></td>
+<td ><b>Comparative Performance in BL21(DE3) strain</b></td>
+<td ><b>Sequence</b></td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303015">http://parts.igem.org/Part:BBa_K4303015</a></td>
<td>BBa_K4303015</td>
<td>ompA</td>
-<td>0.66</td>
+<td>0.8865</td>
+<td>0.6357</td>
<td>CGCCAGGGGTGCTCGGCATAAGCCGAAGATATCGGTAGAGTTAATATTGAGCAGATCCCCCGGTGAAGGATTTAACCGTGTTATCTCGTTGGAGATATTCATGGCGTATTTTGGATGATAACGAGGCGCAAAAA</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303016">http://parts.igem.org/Part:BBa_K4303016</a></td>
<td>BBa_K4303016</td>
<td>mopB</td>
-<td>0.26</td>
+<td>0.3658</td>
+<td>0.2928</td>
<td>ACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCA</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303017">http://parts.igem.org/Part:BBa_K4303017</a></td>
<td>BBa_K4303017</td>
<td>CspF</td>
-<td>1.22</td>
+<td>1.1638</td>
+<td>0.6922</td>
<td>GGAATTTTT</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303007">http://parts.igem.org/Part:BBa_K4303007</a></td>
<td>BBa_K4303007</td>
<td>CspH</td>
-<td>0.27</td>
+<td>0.2438</td>
+<td>0.4194</td>
<td>GCAGCGCAGTATTTTCAGTAAGGAATTTGT</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303008">http://parts.igem.org/Part:BBa_K4303008</a></td>
<td>BBa_K4303008</td>
<td>syn2D</td>
-<td>0.01</td>
+<td>0.0831</td>
+<td>0.1795</td>
<td>AGCCAGGGGTGCTCGGCATAAGCCGAAGATATCGGTAGAGTTAATATTGAGCAGATCCCCCGGTCGTATTTTGGATGACTAGAGAAAGAGGAGAAA</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303008">http://parts.igem.org/Part:BBa_K4303009</a></td>
<td>BBa_K4303009</td>
<td>syn2e</td>
-<td>0.01</td>
+<td>0.0160</td>
+<td>0.0263</td>
<td>AACGTCGACTTATCTCGAGTGAGATATTGTTGACGGTTACCGTATTTTCTAGAGAAAGAGGAGAAA</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303011">http://parts.igem.org/Part:BBa_K4303011</a></td>
<td>BBa_K4303011</td>
<td>syn2h</td>
-<td>0.01</td>
+<td>0.0948</td>
+<td>0.1602</td>
<td>AACGTCGACTTATCTCGAGACTGCAGTTCAATAGAGATATTGTTGACGGTACCGTATTTTCGTATTTTGGATGACTAGAGAAAGAGGAGAAA</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303011">http://parts.igem.org/Part:BBa_K4303012</a></td>
<td>BBa_K4303012</td>
-<td>u9</td>
-<td>0.13</td>
+<td>U9</td>
+<td>0.1926</td>
+<td>0.3025</td>
<td>GGTACATTAGAAAGGAGGAATGTACC</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303011">http://parts.igem.org/Part:BBa_K4303013</a></td>
<td>BBa_K4303013</td>
-<td>u10</td>
-<td>0.17</td>
+<td>U10</td>
+<td>0.1765</td>
+<td>0.2911</td>
<td>GTACATTAGAAAGGAGGAATGTACC</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303011">http://parts.igem.org/Part:BBa_K4303014</a></td>
<td>BBa_K4303014</td>
-<td>u13</td>
-<td>0.01</td>
+<td>U13</td>
+<td>0.0816</td>
+<td>0.1022</td>
<td>GTGATTAGAAAGGAGGAATGTACA</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303006">http://parts.igem.org/Part:BBa_K4303006</a></td>
<td>BBa_K4303006</td>
<td>B1016</td>
-<td>0.68</td>
+<td>0.6418</td>
+<td>1.1264</td>
<td>ACTTTTCTTTGCATAGATTGACTCAGAAAAACGTTTAAGGGTGGGTGGC</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303005">http://parts.igem.org/Part:BBa_K4303005</a></td>
<td>BBa_K4303005</td>
<td>yeiG</td>
-<td>0.77</td>
+<td>1.0177</td>
+<td>1.1571</td>
<td>ACAACACAACAAGGAGCCACGC</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303003">http://parts.igem.org/Part:BBa_K4303003</a></td>
<td>BBa_K4303003</td>
<td>ynfA</td>
-<td>0.84</td>
+<td>0.8817</td>
+<td>1.2123</td>
<td>ATACATGATGTCAATAAGAGACAAAG</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303002">http://parts.igem.org/Part:BBa_K4303002</a></td>
<td>BBa_K4303002</td>
<td>ahpC</td>
-<td>0.61</td>
+<td>0.9372</td>
+<td>1.1641</td>
<td>ATCGAAAACACGGAGGAAGTATAG</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303001">http://parts.igem.org/Part:BBa_K4303001</a></td>
<td>BBa_K4303001</td>
<td>yhjT</td>
-<td>0.61</td>
+<td>0.8341</td>
+<td>0.9736</td>
<td>AGACAAAATGGTGAC</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303000">http://parts.igem.org/Part:BBa_K4303000</a></td>
<td>BBa_K4303000</td>
<td>sfsA</td>
-<td>1.16</td>
+<td>1.1392</td>
+<td>1.0330</td>
<td >GCGCTAACGCAATAACAAGGATTGTCGCA</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303018">http://parts.igem.org/Part:BBa_K4303018</a></td>
<td>BBa_K4303018</td>
-<td>Mutant17 CspF</td>
-<td>1.17</td>
+<td>SDM17</td>
+<td>1.0323</td>
+<td>0.2794</td>
<td>GGGATTTTT</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303019">http://parts.igem.org/Part:BBa_K4303019</a></td>
<td>BBa_K4303019</td>
-<td>Mutant2 CspF</td>
-<td>1.21</td>
+<td>SDM2</td>
+<td>0.9995</td>
+<td>0.6127</td>
<td>GGAGTTTTT</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303020">http://parts.igem.org/Part:BBa_K4303020</a></td>
<td>BBa_K4303020</td>
-<td>Mutant3 CspF</td>
-<td>1.1</td>
+<td>SDM3</td>
+<td>0.9501</td>
+<td>0.3737</td>
<td>GGAATATTT</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303021">http://parts.igem.org/Part:BBa_K4303021</a></td>
<td>BBa_K4303021</td>
-<td>Mutant23 CspF</td>
-<td>0.97</td>
+<td>SDM23</td>
+<td>1.1571</td>
+<td>0.5179</td>
<td>GGAATTTTA</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303022">http://parts.igem.org/Part:BBa_K4303022</a></td>
<td>BBa_K4303022</td>
-<td>Mutant5 CspF</td>
-<td>1.15</td>
+<td>SDM5</td>
+<td>1.1293</td>
+<td>0.5208</td>
<td>GGAATTTTC</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303023">http://parts.igem.org/Part:BBa_K4303023</a></td>
<td>BBa_K4303023</td>
-<td>Mutant19 CspF</td>
-<td>1.13</td>
+<td>SDM19</td>
+<td>1.0667</td>
+<td>0.6004</td>
<td>GTAATTTTT</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303024">http://parts.igem.org/Part:BBa_K4303024</a></td>
<td>BBa_K4303024</td>
-<td>Mutant10 CspF</td>
-<td>1.18</td>
+<td>SDM10</td>
+<td>1.2081</td>
+<td>0.4340</td>
<td>GGAAGTTTT</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303026">http://parts.igem.org/Part:BBa_K4303026</a></td>
<td>BBa_K4303026</td>
-<td>Mutant27 CspF</td>
-<td>1.3</td>
+<td>SDM27</td>
+<td>0.9891</td>
+<td>0.6213</td>
<td>GGAATTTCT</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303027">http://parts.igem.org/Part:BBa_K4303027</a></td>
<td>BBa_K4303027</td>
-<td>Mutant26 CspF</td>
-<td>1.16</td>
+<td>SDM26</td>
+<td>1.0168</td>
+<td>0.4426</td>
<td>GGACTTTTT</td>
</tr>
<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303028">http://parts.igem.org/Part:BBa_K4303028</a></td>
<td>BBa_K4303028</td>
-<td>Mutant9 CspF</td>
-<td>1.09</td>
+<td>SDM9</td>
+<td>0.9329</td>
+<td>0.7207</td>
<td>GGAACTTTT</td>
</tr>
+<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303029">http://parts.igem.org/Part:BBa_K4303029</a></td>
+<td>BBa_K4303029</td>
+<td>katE</td>
+<td>0.1053</td>
+<td>0.1374</td>
+<td>TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCA</td>
+</tr>
+
+<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303030">http://parts.igem.org/Part:BBa_K4303030</a></td>
+<td>BBa_K4303030</td>
+<td>Syn2F</td>
+<td>0.5468</td>
+<td>0.3400</td>
+<td>AACGTCGACTTATCTCGAGACTGCAGTTCAATAGAGATATTGTTGACGGTACCGTATTTTCTAGAGAAAGAGGAGAAA</td>
+</tr>
+
+<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303031">http://parts.igem.org/Part:BBa_K4303031</a></td>
+<td>BBa_K4303031</td>
+<td>wrbA</td>
+<td>0.1963</td>
+<td>0.2703</td>
+<td>AGTGGTAGCGAATCGCTACGGAATAGAGATAACACGAGGAGTGGTTAGAA</td>
+</tr>
+
</tbody>
</table>
</div>
--
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