diff --git a/wiki/pages/proof-of-concept.html b/wiki/pages/proof-of-concept.html index 8883e25ea4de61a5051de75fd7eef884f1fd972c..0fc9bc58392e912930a503662dc8ae6f0ca2c110 100644 --- a/wiki/pages/proof-of-concept.html +++ b/wiki/pages/proof-of-concept.html @@ -24,195 +24,246 @@ The variations received in the expression values ratifies is in sync with our ex <div class="table-responsive"> <table class="table"> <tbody> -<tr > <td >Links</td> -<td >Name</td> -<td >Symbol</td> -<td >Comparative Performace</td> -<td >Sequence</td> +<tr > <td > <b>Links</b></td> +<td ><b>Name</b></td> +<td ><b>Symbol</b></td> +<td ><b>Comparative Performance in DH5alpha strain</b></td> +<td ><b>Comparative Performance in BL21(DE3) strain</b></td> +<td ><b>Sequence</b></td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303015">http://parts.igem.org/Part:BBa_K4303015</a></td> <td>BBa_K4303015</td> <td>ompA</td> -<td>0.66</td> +<td>0.8865</td> +<td>0.6357</td> <td>CGCCAGGGGTGCTCGGCATAAGCCGAAGATATCGGTAGAGTTAATATTGAGCAGATCCCCCGGTGAAGGATTTAACCGTGTTATCTCGTTGGAGATATTCATGGCGTATTTTGGATGATAACGAGGCGCAAAAA</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303016">http://parts.igem.org/Part:BBa_K4303016</a></td> <td>BBa_K4303016</td> <td>mopB</td> -<td>0.26</td> +<td>0.3658</td> +<td>0.2928</td> <td>ACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCA</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303017">http://parts.igem.org/Part:BBa_K4303017</a></td> <td>BBa_K4303017</td> <td>CspF</td> -<td>1.22</td> +<td>1.1638</td> +<td>0.6922</td> <td>GGAATTTTT</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303007">http://parts.igem.org/Part:BBa_K4303007</a></td> <td>BBa_K4303007</td> <td>CspH</td> -<td>0.27</td> +<td>0.2438</td> +<td>0.4194</td> <td>GCAGCGCAGTATTTTCAGTAAGGAATTTGT</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303008">http://parts.igem.org/Part:BBa_K4303008</a></td> <td>BBa_K4303008</td> <td>syn2D</td> -<td>0.01</td> +<td>0.0831</td> +<td>0.1795</td> <td>AGCCAGGGGTGCTCGGCATAAGCCGAAGATATCGGTAGAGTTAATATTGAGCAGATCCCCCGGTCGTATTTTGGATGACTAGAGAAAGAGGAGAAA</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303008">http://parts.igem.org/Part:BBa_K4303009</a></td> <td>BBa_K4303009</td> <td>syn2e</td> -<td>0.01</td> +<td>0.0160</td> +<td>0.0263</td> <td>AACGTCGACTTATCTCGAGTGAGATATTGTTGACGGTTACCGTATTTTCTAGAGAAAGAGGAGAAA</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303011">http://parts.igem.org/Part:BBa_K4303011</a></td> <td>BBa_K4303011</td> <td>syn2h</td> -<td>0.01</td> +<td>0.0948</td> +<td>0.1602</td> <td>AACGTCGACTTATCTCGAGACTGCAGTTCAATAGAGATATTGTTGACGGTACCGTATTTTCGTATTTTGGATGACTAGAGAAAGAGGAGAAA</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303011">http://parts.igem.org/Part:BBa_K4303012</a></td> <td>BBa_K4303012</td> -<td>u9</td> -<td>0.13</td> +<td>U9</td> +<td>0.1926</td> +<td>0.3025</td> <td>GGTACATTAGAAAGGAGGAATGTACC</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303011">http://parts.igem.org/Part:BBa_K4303013</a></td> <td>BBa_K4303013</td> -<td>u10</td> -<td>0.17</td> +<td>U10</td> +<td>0.1765</td> +<td>0.2911</td> <td>GTACATTAGAAAGGAGGAATGTACC</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303011">http://parts.igem.org/Part:BBa_K4303014</a></td> <td>BBa_K4303014</td> -<td>u13</td> -<td>0.01</td> +<td>U13</td> +<td>0.0816</td> +<td>0.1022</td> <td>GTGATTAGAAAGGAGGAATGTACA</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303006">http://parts.igem.org/Part:BBa_K4303006</a></td> <td>BBa_K4303006</td> <td>B1016</td> -<td>0.68</td> +<td>0.6418</td> +<td>1.1264</td> <td>ACTTTTCTTTGCATAGATTGACTCAGAAAAACGTTTAAGGGTGGGTGGC</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303005">http://parts.igem.org/Part:BBa_K4303005</a></td> <td>BBa_K4303005</td> <td>yeiG</td> -<td>0.77</td> +<td>1.0177</td> +<td>1.1571</td> <td>ACAACACAACAAGGAGCCACGC</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303003">http://parts.igem.org/Part:BBa_K4303003</a></td> <td>BBa_K4303003</td> <td>ynfA</td> -<td>0.84</td> +<td>0.8817</td> +<td>1.2123</td> <td>ATACATGATGTCAATAAGAGACAAAG</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303002">http://parts.igem.org/Part:BBa_K4303002</a></td> <td>BBa_K4303002</td> <td>ahpC</td> -<td>0.61</td> +<td>0.9372</td> +<td>1.1641</td> <td>ATCGAAAACACGGAGGAAGTATAG</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303001">http://parts.igem.org/Part:BBa_K4303001</a></td> <td>BBa_K4303001</td> <td>yhjT</td> -<td>0.61</td> +<td>0.8341</td> +<td>0.9736</td> <td>AGACAAAATGGTGAC</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303000">http://parts.igem.org/Part:BBa_K4303000</a></td> <td>BBa_K4303000</td> <td>sfsA</td> -<td>1.16</td> +<td>1.1392</td> +<td>1.0330</td> <td >GCGCTAACGCAATAACAAGGATTGTCGCA</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303018">http://parts.igem.org/Part:BBa_K4303018</a></td> <td>BBa_K4303018</td> -<td>Mutant17 CspF</td> -<td>1.17</td> +<td>SDM17</td> +<td>1.0323</td> +<td>0.2794</td> <td>GGGATTTTT</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303019">http://parts.igem.org/Part:BBa_K4303019</a></td> <td>BBa_K4303019</td> -<td>Mutant2 CspF</td> -<td>1.21</td> +<td>SDM2</td> +<td>0.9995</td> +<td>0.6127</td> <td>GGAGTTTTT</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303020">http://parts.igem.org/Part:BBa_K4303020</a></td> <td>BBa_K4303020</td> -<td>Mutant3 CspF</td> -<td>1.1</td> +<td>SDM3</td> +<td>0.9501</td> +<td>0.3737</td> <td>GGAATATTT</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303021">http://parts.igem.org/Part:BBa_K4303021</a></td> <td>BBa_K4303021</td> -<td>Mutant23 CspF</td> -<td>0.97</td> +<td>SDM23</td> +<td>1.1571</td> +<td>0.5179</td> <td>GGAATTTTA</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303022">http://parts.igem.org/Part:BBa_K4303022</a></td> <td>BBa_K4303022</td> -<td>Mutant5 CspF</td> -<td>1.15</td> +<td>SDM5</td> +<td>1.1293</td> +<td>0.5208</td> <td>GGAATTTTC</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303023">http://parts.igem.org/Part:BBa_K4303023</a></td> <td>BBa_K4303023</td> -<td>Mutant19 CspF</td> -<td>1.13</td> +<td>SDM19</td> +<td>1.0667</td> +<td>0.6004</td> <td>GTAATTTTT</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303024">http://parts.igem.org/Part:BBa_K4303024</a></td> <td>BBa_K4303024</td> -<td>Mutant10 CspF</td> -<td>1.18</td> +<td>SDM10</td> +<td>1.2081</td> +<td>0.4340</td> <td>GGAAGTTTT</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303026">http://parts.igem.org/Part:BBa_K4303026</a></td> <td>BBa_K4303026</td> -<td>Mutant27 CspF</td> -<td>1.3</td> +<td>SDM27</td> +<td>0.9891</td> +<td>0.6213</td> <td>GGAATTTCT</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303027">http://parts.igem.org/Part:BBa_K4303027</a></td> <td>BBa_K4303027</td> -<td>Mutant26 CspF</td> -<td>1.16</td> +<td>SDM26</td> +<td>1.0168</td> +<td>0.4426</td> <td>GGACTTTTT</td> </tr> <tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303028">http://parts.igem.org/Part:BBa_K4303028</a></td> <td>BBa_K4303028</td> -<td>Mutant9 CspF</td> -<td>1.09</td> +<td>SDM9</td> +<td>0.9329</td> +<td>0.7207</td> <td>GGAACTTTT</td> </tr> +<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303029">http://parts.igem.org/Part:BBa_K4303029</a></td> +<td>BBa_K4303029</td> +<td>katE</td> +<td>0.1053</td> +<td>0.1374</td> +<td>TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCA</td> +</tr> + +<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303030">http://parts.igem.org/Part:BBa_K4303030</a></td> +<td>BBa_K4303030</td> +<td>Syn2F</td> +<td>0.5468</td> +<td>0.3400</td> +<td>AACGTCGACTTATCTCGAGACTGCAGTTCAATAGAGATATTGTTGACGGTACCGTATTTTCTAGAGAAAGAGGAGAAA</td> +</tr> + +<tr > <td ><a href="http://parts.igem.org/Part:BBa_K4303031">http://parts.igem.org/Part:BBa_K4303031</a></td> +<td>BBa_K4303031</td> +<td>wrbA</td> +<td>0.1963</td> +<td>0.2703</td> +<td>AGTGGTAGCGAATCGCTACGGAATAGAGATAACACGAGGAGTGGTTAGAA</td> +</tr> + </tbody> </table> </div>